Package: velociraptr 1.1.0

velociraptr: Fossil Analysis

Functions for downloading, reshaping, culling, cleaning, and analyzing fossil data from the Paleobiology Database <https://paleobiodb.org>.

Authors:Andrew A. Zaffos

velociraptr_1.1.0.tar.gz
velociraptr_1.1.0.zip(r-4.7)velociraptr_1.1.0.zip(r-4.6)velociraptr_1.1.0.zip(r-4.5)
velociraptr_1.1.0.tgz(r-4.6-any)velociraptr_1.1.0.tgz(r-4.5-any)
velociraptr_1.1.0.tar.gz(r-4.7-any)velociraptr_1.1.0.tar.gz(r-4.6-any)
velociraptr_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
velociraptr/json (API)

# Install 'velociraptr' in R:
install.packages('velociraptr', repos = c('https://aazaff.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.15 score 1 stars 28 scripts 159 downloads 21 exports 12 dependencies

Last updated from:4551ba9b15. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE106
source / vignettesOK152
linux-release-x86_64NOTE115
macos-release-arm64NOTE153
macos-oldrel-arm64NOTE164
windows-develNOTE64
windows-releaseNOTE57
windows-oldrelNOTE75
wasm-releaseOK101

Exports:abundanceMatrixageRangescleanTaxonomycompleteTurnoversconstrainAgescullMatrixdownloadPaleogeographydownloadPBDBdownloadPlacesdownloadTimefixedLatitudemeanAlphamultiplicativeBetamultiplyAgesnotEndemicpresenceMatrixsampleBetataxonAlphataxonBetatotalBetatotalGamma

Dependencies:classclassIntDBIe1071KernSmoothMASSproxyRcpps2sfunitswk

Readme and manuals

Help Manual

Help pageTopics
Create a community matrix of taxon abundancesabundanceMatrix
Find the age range for each taxon in a dataframeageRanges
Clean taxonomic namescleanTaxonomy
Constrain a dataset to only occurrences within a certain age-rangeconstrainAges constrainAges,multiplyAges multiplyAges
Cull rare taxa and depauperate samplescullMatrix cullMatrix,errorMatrix,culltaxa,cullSamples,occurrencesFlag,diversityFlag,softCull,softTaxa,softSamples
Downloads paleogeographic mapsdownloadPaleogeography
Download Occurrences from the Paleobiology DatabasedownloadPBDB
Download Shapefile of PlacesdownloadPlaces trueWOF
Download geologic timescaledownloadTime
Download fixed-latitude equal-area gridfixedLatitude
Multiplicative Diversity PartitioningcompleteTurnovers multiplicativeBeta multiplicativeBeta,completeTurnovers,notEndemic notEndemic
Create a matrix of presences and absencespresenceMatrix
Additive Diversity Partitioning functionsmeanAlpha sampleBeta taxonAlpha taxonAlpha,meanAlpha,taxonBeta,sampleBeta,totalGamma taxonBeta totalBeta totalGamma